Lighthouse has a new layout. Prefer the old one? Return to the old layout, and switch back any time from the link at the top of each page.

Moa cp broken?

#27

[Cfljam@pgenome 21.BLAST_unfiltered]$ moa show db ../20.BLASTN_db_repeats/OnionRepeat
eval 1e-10
gff_blasthit F
gff_source BLAST
input ../01.UnfilteredGSSReads/JBVR.fasta
nohits 50
nothreads 2
outgff gff/.gff
output out/
.out
postcommand
precommand
program blastn
project repeats
title Blast unfiltered onto repeat DB
[Cfljam@pgenome 21.BLAST_unfiltered]$ cd .. [Cfljam@pgenome Repeats]$ ls 00.rawdata 01.UnfilteredGSSReads 02.FilteredGSSReads 10.RepeatScout 11.repeatmasker 15.BLASTN_repeats 16.BLASTX_uniprotPlants 20.BLASTN_db_repeats 21.BLAST_unfiltered
[Cfljam@pgenome Repeats]$ moa cp 21.BLAST_unfiltered 22.BLAST_filtered INF Copying from 21.BLAST_unfiltered to 22.BLAST_filtered
Error: Need 21.BLAST_unfiltered to be a moa directory
[Cfljam@pgenome Repeats]$ pwd /data/moa/onion/Repeats [Cfljam@pgenome Repeats]$

Reported by john.mccallum (at plantandfood) · May 11th, 2011 @ 11:48 PM

State: resolved
Milestone: v1.1
Assigned to: MF MF

Activity

  1. MF
    MF
    • State changed from new to resolved

    Wow - fixing 24 broke this one - now both are ok.

    cheers
    Mark

    May 12th, 2011 @ 12:20 AM

Please Sign in or create a free account to add a new ticket.

With your very own profile, you can contribute to projects, track your activity, watch tickets, receive and update tickets through your email and much more.