Map template "show" informativeness
Reported by john.mccallum (at plantandfood) | May 25th, 2011 @ 09:16 PM | in v1.1
I think that 'show' should reveal the {{input}} and {{output}}
tags
so that moa show is more useful
ie make moa show, show "fastaExtract -l
../11.retrieve_USDA_PR1/basename {{input}} .fasta.list
-f {{input}} > {{output}}"
NOT
"fastaExtract -l ../11.retrieve_USDA_PR1/basename
.fasta.list -f > "
[cfljam@pgenome 11.retrieve_USDA_PR1]$ moa set process
process:
$ fastaExtract -l ../11.retrieve_USDA_PR1/basename {{input}}
.fasta.list -f {{input}} > {{output}} [cfljam@pgenome
11.retrieve_USDA_PR1]$ moa show input
/data/moa/db/onion/80.USDAARS/.fasta
output _PR1.fasta
postcommand
precommand
process fastaExtract -l ../11.retrieve_USDA_PR1/basename
.fasta.list -f >
project
title retrieve USDA ARS PR1 homologs
[cfljam@pgenome 11.retrieve_USDA_PR1]$
Comments and changes to this ticket
-
MF May 31st, 2011 @ 01:14 AM
- State changed from “new” to “resolved”
(from [691caf8fe33f800076701f6b22bbe910396ad71f]) Improved moa show output - show {{ var }} codes again [#30 state:resolved] https://github.com/mfiers/Moa/commit/691caf8fe33f800076701f6b22bbe9...
Please Sign in or create a free account to add a new ticket.
With your very own profile, you can contribute to projects, track your activity, watch tickets, receive and update tickets through your email and much more.
Create new ticket
Create your profile
Help contribute to this project by taking a few moments to create your personal profile. Create your profile »
lightweight workflows for bioinformatics
People watching this ticket
john.mccallum (at plantandfood)
MF
Referenced by
-
30
Map template "show" informativeness
(from [691caf8fe33f800076701f6b22bbe910396ad71f])
Improve...