broken moa?
Reported by john.mccallum (at plantandfood) | July 19th, 2011 @ 10:36 PM | in v1.1
[cfljam@pgenome 10.search_onion_nr]$ pwd
/data/moa/onion/70.CG_marker_design/80.TFs/10.search_onion_nr
[cfljam@pgenome 10.search_onion_nr]$ moa show jobid L
search_onion_nr
postcommand o (undefined)
precommand L transeq -sequence
/data/moa/db/onion/50.PFR_BioView/hort_onion.nr -outseq
hort_onion.nr.faa -frame 6
process L hmmsearch ../00.hmm/MYB.hmm hort_onion.nr.faa >
MYB.hmmsearch
project o (undefined)
title L search for MYBs in Onion Nr translations
[cfljam@pgenome 10.search_onion_nr]$ moa run INF Acquired job id
8
Translate nucleic acid sequences
Not a moa job
Cannot execute 'moa run'
maybe try: 'moa help'
Moa: Error running run (5 sec)
[cfljam@pgenome 10.search_onion_nr]$ moa err Error: No stderr
found
[cfljam@pgenome 10.search_onion_nr]$
Comments and changes to this ticket
-
MF January 8th, 2012 @ 09:56 PM
- State changed from “new” to “resolved”
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lightweight workflows for bioinformatics
john.mccallum (at plantandfood)
MF