executables in moa simple dir
Reported by john.mccallum (at plantandfood) | August 3rd, 2011 @ 02:24 AM | in v1.1
MOA strips off ./ when setting process
[cfljam@pgenome 10.bin]$ moa set process process:
./bin_FIE_data.R 00.data D049_WXT.csv binned_LTQ-mean.RData [cfljam@pgenome 10.bin]$ moa show jobid L bin
postcommand L echo "Moving binary file to this dir"; mv ../../00.data/binned_LTQ-mean.RData .
precommand L sed -e '/nion/d' -e 's/somepath/..\/..\/00.data/' ../../00.data/DO49.csv > ../../00.data/D049_Brassica.csv
process L bin_FIE_data.R 00.data D049_WXT.csv binned_LTQ-mean.RData
project o (undefined)
title L bin WxT data from run D049
[cfljam@pgenome 10.bin]$ [ pgenome ][
Comments and changes to this ticket
-
MF August 14th, 2011 @ 09:32 PM
- State changed from “new” to “resolved”
(from [f79f8c568eda47290a954496fae2ca2396a773cf]) Checks if a relative link needs to be updated by parameter type [#37 state:resolved] https://github.com/mfiers/Moa/commit/f79f8c568eda47290a954496fae2ca...
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lightweight workflows for bioinformatics
john.mccallum (at plantandfood)
MF