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MOa cp #$@!#@Boom

#44

[cfljam@pgenome 35.FT_reseq_2011]$ pwd /data/moa/onion/25.resequencing/35.FT_reseq_2011 [cfljam@pgenome 35.FT_reseq_2011]$ moa cp 70.popoolation_Tajima 69.popoolation_Tajima_optimise MOA CRITICAL|12/08/27 18:38:43|moa.job # !! Error loading backend gnumake
ERROR!
Unexpected error
Warning: Encountered a run error?
Traceback (most recent call last):
File "/home/cfljam/opt/moa/bin/moa", line 324, in

run_1()

File "/home/cfljam/opt/moa/bin/moa", line 284, in run_1

run_2()

File "/home/cfljam/opt/moa/bin/moa", line 230, in run_2

run_3(wd)

File "/home/cfljam/opt/moa/bin/moa", line 117, in run_3

job = moa.job.Job(wd)

File "/home/cfljam/opt/moa/lib/python/moa/job.py", line 151, in init

self.loadTemplate()

File "/home/cfljam/opt/moa/lib/python/moa/job.py", line 487, in loadTemplate

self.loadBackend()

File "/home/cfljam/opt/moa/lib/python/moa/job.py", line 508, in loadBackend

locals(), [moduleName], -1)

ImportError: No module named gnumake

Reported by john.mccallum (at plantandfood) · August 27th, 2012 @ 06:39 AM

State: new
Milestone: v1.1
Assigned to: MF MF

Activity

  1. MF
    MF

    Wow - are there still jobs that use gnumake?? I deprecated that
    probably more than a year ago...

    I've fixed all jobs that were still gnumake - most of these were
    'simple' jobs - so easy to fix. Had to rewrite the sffinfo template.

    there might still be bugs - so please proceed with some caution

    btw - if you want to copy a directory with all subdirectories you should use
    moa cp -r

    cheers
    M

    August 27th, 2012 @ 07:30 AM

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